Precomputed data files for the current release
Main Data Set | |
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Postgres Chado Database Dump | |
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Drosophila Data | |
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Synonyms | |
Item
Chado XML
Reporting XML
Other
FlyBase Synonyms
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Genes | |
Item
Chado XML
Reporting XML
Other
Genetic Interaction table
RNA-Seq RPKM values
Physical Interaction table
FBgn ⇔ DB Accession IDs
FBgn ⇔ Annotation ID
FBgn ⇔ GLEANR IDs
FBgn ⇔ FBtr ⇔ FBpp IDs
FBgn Exons ⇔ Affy1
FBgn Exons ⇔ Affy2
Genes GO data
Genes map table
Gene summaries
Orthologs
Unique Protein Isoforms
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Alleles and Stocks | |
Item
Chado XML
Reporting XML
Other
Stock data
Genetic Interactions
Phenotypic data
Alleles ⇔ Genes
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Human Disease | |
Item
Chado XML
Reporting XML
Other
Human disease model data
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Nomenclature | |
Item
Chado XML
Reporting XML
Other
Species abbreviation list
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Ontology Terms | |
Frozen Files used for this release of FlyBase | |
Item
Chado XML
Reporting XML
Other
FBbt: (fly_anatomy)
FBdv: (fly_development)
FBcv: (controlled vocab)
FBsv: (stock ontology)
GO: (gene ontology)
FBbi: (image ontology)
SO: (sequence ontology)
DO: (human disease ontology)
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Current 'Live' Files | |
Item
Chado XML
Reporting XML
Other
FBbt: (fly_anatomy)
FBdv: (fly_development)
FBcv: (controlled vocab)
GO: (gene ontology)
FBbi: (image ontology)
SO: (sequence ontology)
DO: (human disease ontology)
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Genomes: Annotation and Sequence | |
All Sequenced Drosophila Species | |
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Drosophila melanogaster (Dmel) | |
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FASTA | |
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GFF | |
Drosophila ananassae (Dana) | |
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FASTA | |
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GFF | |
Drosophila erecta (Dere) | |
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FASTA | |
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GFF | |
Drosophila grimshawi (Dgri) | |
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FASTA | |
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GFF | |
Drosophila mojavensis (Dmoj) | |
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FASTA | |
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GFF | |
Drosophila persimilis (Dper) | |
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FASTA | |
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GFF | |
Drosophila pseudoobscura pseudoobscura (Dpse) | |
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FASTA | |
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GFF | |
Drosophila sechellia (Dsec) | |
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FASTA | |
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GFF | |
Drosophila simulans (Dsim) | |
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FASTA | |
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GFF | |
Drosophila virilis (Dvir) | |
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FASTA | |
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GFF | |
Drosophila willistoni (Dwil) | |
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FASTA | |
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GFF | |
Drosophila yakuba (Dyak) | |
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FASTA | |
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GFF | |
Transcripts and Polypeptides | |
Item
Chado XML
Reporting XML
Other
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Transposons, Transgenic Constructs, and Insertions | |
Item
Chado XML
Reporting XML
Other
Transgenic construct maps
Map data for insertions
Transposable elements (canonical set)
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Aberrations | |
Item
Chado XML
Reporting XML
Other
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Large Dataset Metadata | |
Item
Chado XML
Reporting XML
Other
Dataset metadata members
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Clones | |
Item
Chado XML
Reporting XML
Other
cDNAs: FBcl ⇔ acc. ID
Genomic: FBcl ⇔ acc. ID
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References | |
Item
Chado XML
Reporting XML
Other
FlyBase FBrf ⇔ PubMed ID ⇔ PMCID ⇔ DOI
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Drosophila Researchers | |
Addresses of Drosophila researchers are copyrighted (GSA) material and only provided for official business of the Fly Board. |
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Map Conversion Tables | |
Item
Chado XML
Reporting XML
Other
Cytological ⇔ Sequence
Cytological ⇔ Genetic
Cyto ⇔ Genetic ⇔ Seq
Genes map table
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